Package: SeqAlignR 0.1.1

SeqAlignR: Sequence Alignment and Visualization Tool

Computes the optimal alignment of two character sequences. Visualizes the result of the alignment in a matrix plot. Needleman, Saul B.; Wunsch, Christian D. (1970) "A general method applicable to the search for similarities in the amino acid sequence of two proteins" <doi:10.1016/0022-2836(70)90057-4>.

Authors:Leonard Persson Norblad [aut, cre], Kamil Slowikowski [ctb]

SeqAlignR_0.1.1.tar.gz
SeqAlignR_0.1.1.zip(r-4.7)SeqAlignR_0.1.1.zip(r-4.6)SeqAlignR_0.1.1.zip(r-4.5)
SeqAlignR_0.1.1.tgz(r-4.6-any)SeqAlignR_0.1.1.tgz(r-4.5-any)
SeqAlignR_0.1.1.tar.gz(r-4.7-any)SeqAlignR_0.1.1.tar.gz(r-4.6-any)
SeqAlignR_0.1.1.tgz(r-4.6-emscripten)
manual.pdf |manual.html
card.svg |card.png
SeqAlignR/json (API)

# Install 'SeqAlignR' in R:
install.packages('SeqAlignR', repos = c('https://leonnorblad.r-universe.dev', 'https://cloud.r-project.org'))

Bug tracker:https://github.com/leonnorblad/seqalignr/issues

On CRAN:

Conda:

2.70 score 6 scripts 173 downloads 1 exports 1 dependencies

Last updated from:054319340c. Checks:7 NOTE, 2 OK. Indexed: yes.

TargetResultTimeFilesSyslog
linux-devel-x86_64NOTE94
source / vignettesOK149
linux-release-x86_64NOTE95
macos-release-arm64NOTE129
macos-oldrel-arm64NOTE176
windows-develNOTE82
windows-releaseNOTE74
windows-oldrelNOTE57
wasm-releaseOK86

Exports:align_sequences

Dependencies:plot.matrix